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A list of all the posts and pages found on the site. For you robots out there is an XML version available for digesting as well.
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Posts
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Blog Post number 4
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Blog Post number 1
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portfolio
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publications
RummiTV: An Interactive Game for the Brazilian Digital TV System
Published in XXVI Simpósio Brasileiro de Telecomunicações, 2008
Conference presentation of our undergraduate internship project.
Recommended citation: Santos, J., Ratamero, E., Arruda, J.P., Dantas, M., Sanchez, M.L. and Saade, D.C.M., 2008. RummiTV: An interactive game for the brazilian digital TV system. In Proc. 26th Symp. Brasileiro Telecomun. (pp. 1-6). http://erickmartins.github.io/files/sbrt2008-rummitv.doc
Modeling Magnetic Resonance Clinical Reports of the Lumbar Spine using OpenEHR Archetypes
Published in XII Congresso Brasileiro de Informática em Saúde, 2010
Conference presentation of my final undergraduate paper.
Recommended citation: Ratamero, E.M., Cook, T., Cavalini, L.T. and Saade, D.C.M., MODELING MAGNETIC RESONANCE CLINICAL REPORTS OF THE LUMBAR SPINE USING OPENEHR ARCHETYPES. http://erickmartins.github.io/files/artigo_final_cbis.pdf
Modelling Peloton Dynamics in Competitive Cycling: A Quantitative Approach
Published in Sports Science Research and Technology Support, 2013
Initial work on modelling cycling pelotons computationally.
Recommended citation: Ratamero, E.M., 2013, September. Modelling peloton dynamics in competitive cycling: a quantitative approach. In International Congress on Sports Science Research and Technology Support (pp. 42-56). Springer, Cham. http://erickmartins.github.io/files/moped_new.pdf
Collective behavior and the identification of phases in bicycle pelotons
Published in Physica A: Statistical Mechanics and its Applications, 2014
We use computational models of pelotons to identify phases on cyclists' collective behaviour.
Recommended citation: Trenchard, H., Richardson, A., Ratamero, E. and Perc, M., 2014. Collective behavior and the identification of phases in bicycle pelotons. Physica A: Statistical Mechanics and its Applications, 405, pp.92-103. http://erickmartins.github.io/files/groupsorting.pdf
A deceleration model for bicycle peloton dynamics and group sorting
Published in Applied Mathematics and Computation, 2015
A further refinement of our previous work on pelotons, identifying a deceleration model that extends my initial work.
Recommended citation: Trenchard, H., Ratamero, E., Richardson, A. and Perc, M., 2015. A deceleration model for bicycle peloton dynamics and group sorting. Applied Mathematics and Computation, 251, pp.24-34. http://erickmartins.github.io/files/groupsorting.pdf
Touching proteins with virtual bare hands
Published in Journal of Computer-Aided Molecular Design, 2018
Visualizing protein–drug complexes and their dynamics in self-made virtual reality using gaming hardware.
Recommended citation: Ratamero, E.M., Bellini, D., Dowson, C.G. and Römer, R.A., 2018. Touching proteins with virtual bare hands. Journal of computer-aided molecular design, 32(6), pp.703-709. https://link.springer.com/article/10.1007/s10822-018-0123-0
Calculating the maximum capacity of intracellular transport vesicles
Published in bioRxiv, 2019
We answer the question: what is the maximum number of cargo molecules that can be packed into a vesicle?
Recommended citation: Ratamero, E.M. and Royle, S.J., 2019. Calculating the maximum capacity of intracellular transport vesicles. https://www.biorxiv.org/content/10.1101/555813v1
talks
teaching
Microscopy and Imaging
M.Sc. course, University of Warwick, Warwick Medical School, 2018
Delivered 4 lectures on basic image analysis and ImageJ/Fiji macro automation and a practical assignment worth 50% of the grade for the module.
Frontier Techniques and Research Skills in Biomedicine
M.Sc. course, University of Warwick, Warwick Medical School, 2018
Delivered a lecture on tidy data and data organisation on spreadsheets.
Physical biology of the cell
M.Sc. course, University of Warwick, Warwick Medical School, 2018
Delivered a lecture on applying basic biophysical principles for subcellular structures, with specific focus on cellular polymers (actin, tubulin).
Microscopy and Imaging
M.Sc. course, University of Warwick, Warwick Medical School, 2019
Delivered 2 lectures on basic image analysis and supervised TAs on delivering other 5 lectures on ImageJ/Fiji macro writing. Created a practical assignment worth 50% of the grade for the module.
Physical biology of the cell
M.Sc. course, University of Warwick, Warwick Medical School, 2019
Delivered a lecture on applying basic biophysical principles for subcellular structures, with specific focus on cellular polymers (actin, tubulin).